CDS

Accession Number TCMCG057C52737
gbkey CDS
Protein Id XP_018458484.1
Location complement(join(27030..27143,27257..27359,27469..27536,27612..27757,34259..35456))
Gene LOC108829319
GeneID 108829319
Organism Raphanus sativus

Protein

Length 542aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018602982.1
Definition PREDICTED: 4-coumarate--CoA ligase-like 4 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description AMP-dependent synthetase and ligase family protein
KEGG_TC -
KEGG_Module M00113        [VIEW IN KEGG]
KEGG_Reaction R07887        [VIEW IN KEGG]
KEGG_rclass RC00014        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K10526        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00592        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00592        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005777        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009611        [VIEW IN EMBL-EBI]
GO:0009694        [VIEW IN EMBL-EBI]
GO:0009695        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0042446        [VIEW IN EMBL-EBI]
GO:0042579        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072330        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATCTCTCATTGATTCCAGAAGCGGTTTCTGCAAATCAAACTCTACATTCTATAGCAAACGCAACCCATTGCCTCTCCCCGCGAATCCTTCCCTTGATATCACCACTTTCATCTCCTCTCAGCCTCACCGCGGCACCACCGCCTTCATCGACGCCGCCACTGGCCACCATTTAACCTTCTCCGCCCTCTGGACAGCCGTGGAACGCGTCGCGGACTGTCTCCACCATGACATCGGGTTACGTAGAGGCCACGTCGTCCTCATCCTCTCTCCCAACTCTATCTACTTCCCCGTCGTCTCCCTCGCAGTAATGTCTCTCGGCGCCGTCGTCACAACCGCGAACACTCTCAACACCGCCGCTGAGATATTAAAACAGGTCGCCGACAGCAACCCGACGCTCGCCTTCACGACCGCCGACCTGGCTCCCAAACTCGCCGGTTCCGGCATCTCCGTCGTACTGGAGCGCGTGGGGTCTACTCGCGGCGTCAACGTCGTCGGTGTCGTGTCTGAGATGATGGAGAAGGAACCGAGGGGGCAGCGAGTGAGAGACCGAGTCAACGAGGAGGACACGGCGATGCTGCTTTACTCGTCGGGCACAACAGGACCGAGCAAAGGAGTGATCTCGTCTCACAAGAACTTAACAGCTCTCGTGGCGAGGTTCGTGTCGGAGAAATCGATATGTGACCAGATTTTCCTCTGCACCGTTCCGATGTTCCACACGTACGGACTACTGTGTTTCTGCATGAGCACCGTAGCGTCGGGTTCGACGGTGGTGATCCTCCGGAGATTCGACCTCCACGGTATGATGGAAGCGGTTGAGAAGTACAGAGCCACGACTCTGGCTTTGGCGCCGCCTGTTGTGGTGGCTATGACTAAAGAAGCGGATGTGATCATGGGCAAGTACGACCTGAGCTCACTTGGAAGGGTGAGATGCGGTGGAGCGCCGTTGAGTAAGGAGGTGACGTTGGGGTTCATGGAGAAATATCCAACGGTTGATATTTTTGCTGGATACGCTTTGACGGAATCGAATGGTGCAGGAGCCTACGTTGATTCGGTGGAGGAGAGCCGAAGATACGGTTCCGTGGGGTTGTTATCGTCCGGTGTGGAGGCGAGGATCGTGGATCCGGATACGGGTCGGCTCATGGGTGTGAACCAAACGGGCGAGCTCTGGCTTAAAGGCCCTTCTATTGCTAAAGGTTATTTTAAAAACCAAGAAGCTACGAATGAAACCATCAACGCCGAAGGATGGTTGAAAACAGGAGATCTTTGCTACATCGATGACGATGGATTTGTTTTCGTTGTGGATCGATTGAAAGAACTAATCAAATACAAAGGCTATCAGGTGCCTCCAGCTGAACTAGAGGCTCTATTGGTTACTCATCCAGACATTCTAGATGCTGCCGTTATTCCATTTCCAGATAAAGAAGCAGGACAATATCCAATGGCCTACGTGACACGAAAGCTGGAGAGCGACCTATCAGAGAAACAAATTATTGACTTCATTTCTAAACAGGTGGCACCGTATAAAAAGATTAGGAAAGTCGTATTTATAAACTCAATACCAAAGAATGCATCTGGCAAGACACTTCGTAAAGATCTAATCAACCTCGCCACTTCTAAAATTTGA
Protein:  
MASLIDSRSGFCKSNSTFYSKRNPLPLPANPSLDITTFISSQPHRGTTAFIDAATGHHLTFSALWTAVERVADCLHHDIGLRRGHVVLILSPNSIYFPVVSLAVMSLGAVVTTANTLNTAAEILKQVADSNPTLAFTTADLAPKLAGSGISVVLERVGSTRGVNVVGVVSEMMEKEPRGQRVRDRVNEEDTAMLLYSSGTTGPSKGVISSHKNLTALVARFVSEKSICDQIFLCTVPMFHTYGLLCFCMSTVASGSTVVILRRFDLHGMMEAVEKYRATTLALAPPVVVAMTKEADVIMGKYDLSSLGRVRCGGAPLSKEVTLGFMEKYPTVDIFAGYALTESNGAGAYVDSVEESRRYGSVGLLSSGVEARIVDPDTGRLMGVNQTGELWLKGPSIAKGYFKNQEATNETINAEGWLKTGDLCYIDDDGFVFVVDRLKELIKYKGYQVPPAELEALLVTHPDILDAAVIPFPDKEAGQYPMAYVTRKLESDLSEKQIIDFISKQVAPYKKIRKVVFINSIPKNASGKTLRKDLINLATSKI